When you have patch files you might need to rebuild the library to get the files to show up in the right order. This is done under Setup–>System and Media Library. There will be an option to clear the media library.
If you have problems or sugestions, feel free to add a message here :)
Thankes for reporting this problem. Do you use the install or portable ? Wich version of Windows and Java du you have ? You could try the newest WD Live Info version 0.69 http://sourceforge.net/projects/wdliveinfo/, and also make sure you have the latest version of Java installed, you can check that here: http://java.com/en/download/installed.jsp