Skipping a partition


I recently bought a 2TB HD which i partitioned it into 3.  One is for Movies, Two is for Documents and Music, and 3rd is for Tv Shows. Is there a way I can make the Hub skip drive 2?  Reason being that it can take 20-25 minutes to sync everytime i plug the usb cable to the hub. And when its finished i can see i have around 15,000 files in the Files section.